Mathematical and Computational Approaches in Biology and Medicine

University of Warsaw, 15-16 June 2009, Warsaw, Poland

Michal Marczyk, Joanna Polanska,
"Analysis of mass spectra of a different cancers including spectra alignment as a pre-processing step."

Short abstract:
Recently mass spectrometry has become the most frequently chosen technique for the analysis of complex protein samples. Such measurements can be used to identify disease-related patterns, which hold potential for early diagnosis, prognosis or drug target research. The key features in a mass spectrum are its peaks. In order to locate the peaks and quantify their intensities, several pre-processing steps are required. We believe that spectra alignment should be one of them. In this study we will present results of analysis of mass spectra of a 3 different cancers: lung cancer, large intestine cancer and head and neck regions cancer. We use a common classifier to identify differential expressions in comparison to healthy group.